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In order to run a transcriptome analysis, your lab must have:
An account on Wexac
Sufficient free storage space (> 400Gb)
Requirements 1 and 2 can be set up by your department secretary or administrator.
3. A "Collaboration" folder within your lab folder, with read and write permissions for the LSCF (Life Science Core Facility) Bioinformatics Unit.
Must be set up by the computing center (contact hpc@weizmann.ac.il).
4. Input data folders in the Collaboration folder with a required structure.
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After completing all of these UTAP setup requirements, login to the http://utap.wexac.weizmann.ac.il website via Firefox or Chrome (the pipeline is NOT compatible with Internet Explorer) with the user name and password of your Weizmann account.
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8) Demultiplexing from FASTQ (need to add a page)
List of links
Pipeline website for Weizmann Institute users: https://utap.wexac.weizmann.ac.il/
Information on UTAP versions
Acknowledgments
Citation:
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